dsRNA Structure Browser
Explore RNA secondary structures with RNA structure probing data • Showing ROC values for each arm independently
dsRNA Explorer
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Total dsRNAs
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High ML Score
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Conserved
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With Probing Data
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Tight CIs
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Both Arms
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High Power
| ID | Chr | ML GTEx | ML Struct | ML Probing | Energy | Length | BP % | Helix (bp) | Loop (nt) | Gene i | Gene j | Conserved | Best ROC | Expts | ROC i | ROC j |
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Table Legend
Green rows = Best overall ROC has tight CI (width <0.1) = High confidence RNA structure probing
Green border = Both arms have ROC ≥0.7
ROC color coding: ≥0.7 | 0.5-0.7 | <0.5
Select a dsRNA from the table to view its structure
Select Reactivity Experiment
Predicted dsRNA Structure
Key Structural Properties
Length
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Loop
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Energy
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Longest Helix
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% Paired
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Genomic Context
Select a dsRNA to view genomic context
Local Folding (RNAfold) - Alternative Hypothesis
Arm i (5')
Arm j (3')